Plot Method for bglmm Objects — plot.bglmm • bmco

Plot Method for bglmm Objects

Usage

# S3 method for class 'bglmm'
plot(x, type = "all", which = "fixed", parameters = NULL, ...)

Arguments

x: A bglmm object returned by bglmm().
type: Character. Type of plot: "trace", "density", "autocorr", or "all". Default is "all".
which: Character. Which component to plot: "fixed" (b), "random" (g), "variance" (tau), or "all". Default is "fixed".
parameters: Character vector. Which parameters to plot. Default is NULL (all parameters).
...: Additional arguments passed to plotting functions.

Value

Invisibly returns NULL (plots are displayed).

Examples

# Uses the pre-computed example object shipped with the package.
# Trace plots for the fixed-effect regression coefficients:
plot(bglmm_fit, type = "trace", which = "fixed")










# Trace plots for the random-effect variance components:
plot(bglmm_fit, type = "trace", which = "variance")